A cracked stack at the roof wouldn't cause leaks inside the house. A compromised stack flashing at the roof easily could. A cast iron stack would take a lot to crack it, but pvc, not as much. It would bend some prior to cracking, though. Hard to tell without being there, though. How old are the boys? Got a digital camera...send them up and take lots of pics - at least one should help tell what's going on. They'll get a kick out of it.